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ID | DATA | Description | Citation | PMID | Size | Updated | Counts | Download |
1 | Partitioned LD score for EAS | baseline annotation of 53 functional categories. | Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases | 29403010 | 276 MB | 2017/12/11 | 6255 | |
2 | Partitioned LD score for EAS | 10 cell-type-groups specific anotation. | Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases | 29403010 | 947 MB | 2017/12/11 | 1905 | |
3 | Partitioned LD score for EAS | 220 cell-type specific annotation. | Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases | 29403010 | 20.1 GB | 2017/12/11 | 14061 |
ID | DATA | Description | Citation | PMID | Size | Updated | Counts | Download |
1 | Allele frequencies of the variants | chromosomal positions (hg19), reference alleles, alternative alleles, alternative allele frequencies of the variants identified by WGS of the Japanese population (n = 1026). | Deep whole-genome sequencing reveals recent selection signatures linked to evolution and disease risk of Japanese | 29691385 | 97.3MB | 2018/4/24 | 766 |
ID | DATA | Description | Citation | PMID | Size | Updated | Counts | Download |
1 | 1KG-SV | SVs detected using MOPline-7t from 414 high coverage whole genome sequencing (WGS) data (99 CEU, 103 CHB, 104 JPT, and 108 YRI samples) from the 1000 Genomes Project (1KG). | Detection of trait-associated structural variations using short-read sequencing | 37388916 | 82.3MB | 2022/4/1 | 58 | |
2 | BBJ-SV | SVs detected using MOPline-7t from 3,258 high coverage WGS data from BioBank Japan (BBJ). SVs in the file are filtered and annotated for their overlapping genes. Genotype data for each individual have been omitted to protect personal information. | Detection of trait-associated structural variations using short-read sequencing | 37388916 | 4.43MB | 2022/4/1 | 110 | |
3 | MOPline sample data | A sample dataset for testing the excecution of MOPline. | 2.82GB | 2022/4/1 | ||||
4 | MOPline sample data output | An output dataset generated with the Sample_data using MOPline-7t. | 567MB | 2022/4/1 | ||||
5 | MOPline singularity sif file | singularity image file for executing MOPline and 10 SV detection tools, except for MELT and INSurVeylor. | 1.5GB | 2024/4/23 |